SamuelLouisVolchenboumMDPhD

PubMed

• 718 citations
  1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
  Carlos Alonso-Blanco, Jorge Andrade, Claude Becker, Felix Bemm, Joy Bergelson
  Cell. 2016-07-14
• 14 citations
  Using big data in pediatric oncology: Current applications and future directions.
  Ajay Major, Suzanne M. Cox, Samuel L. Volchenboum
  Seminars in Oncology. 2020-02-01
• 2 citations
  Sociome Data Commons: A scalable and sustainable platform for investigating the full social context and determinants of health.
  Sandra Tilmon, Sharmilee Nyenhuis, Anthony Solomonides, Bruno Barbarioli, Ankur Bhargava
  Journal of Clinical and Translational Science. 2023-01-01

Journal Articles

• Effect of stromal contamination in SNP array analysis of neuroblastoma tumors. Cancer Res.  
  Volchenboum SL, Li S, Elechko, Castro L, Bayul TN, Attiyeh EF, Reynolds CP, Maris JM, Diller L, Look AT, George RE, Cancer Res. 2009; 69(10): 143-9
• Rapid Validation of Mascot Search Results via Stable Isotope Labeling, Pair Picking and Deconvolution of Fragmentation Patterns. Molecular and Cellular Proteomics.  
  Volchenboum SL, Kristjansdottir K, Wolfgeher D, Kron SJ, Mol Cell Proteomics. 2009; Epub May 12
• Locoregional MYCN-amplified neuroblastoma.  
  Morales La Madrid A, Volchenboum S, Gastier-Foster JM, Pyatt R, Liu D, Pytel P, Lavarino C, Rodriguez E, Cohn SL, Pediatr Blood Cancer. 2012 Oct;59(4):736-8. doi: 10.1002/pbc.24003. Epub 2012 Jan 1
• Proteomics for Cancer Biomarker Discovery.  
  Volchenboum SL, Cambridge, MA: Massachusetts Institute of Technology (M.S.);
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Books/Book Chapters

• The VIIth International Congress on Inborn Errors of Metabolism. 
  Chapter: Characterization of the Type III mutation in isovaleric acidemia. 
  Volchenboum SL and Vockley JVienna, Austria
• The American mutations in the isovaleryl-CoA dehydrogenase gene responsible for isovaleric academia. In: The VIIth International Congress for Inborn Errors of Metabolism. 
  Chapter: Characterization of point mutations in the isovaleryl-CoA dehydrogenase gene responsible for isovaleric academia: correlation to enzyme function and clinical course. 
  Vockley J., Anderson BD, Volchenboum SL, Battaile KP, and Mohsen A-WBook of abstracts, Vienna,Austria
• The American Journal of Human Genetics. 
  Chapter: Characterization of point mutations in the isovaleryl-CoA dehydrogenase gene responsible for isovaleric academia: correlation to enzyme function and clinical course. 
  Vockley J., Anderson BD, Volchenboum SL, Battaile KP, and Mohsen A-W
• Laughing Your Way to Passing the Pediatric Boards: Taking the Boredom Out of Board Review. 
  Chapter: Technical Editor for chapters on Preventive Medicine, Dysmorphology, Hematology/Oncology, Neurology, Rheumatology, Infectious Diseases. 
  Volchenboum SLStu Silverstein., Medhumor
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Abstracts/Posters

• Development of an open-source, flexible framework for inter-institutional data sharing and collaboration.
  Kirby C, Ambros PF, Billiter D, London WB, Mendonca E, Monclair T, Pearson ADJ, Cohn SL, Volchenboum SL, ASCO 2012 Annual Meeting, Chicago IL
• Integration of genomic and proteomic data to identify MYCN-regulated genes, proteins, and interaction networks in neuroblastoma cells.
  Kristjansdottir K, Bontempo KM, Regan KE, Khan S, Volchenboum SL, ASCO 2012 Annual Meeting, Chicago IL
• Identifying TrkA and TrkB Specific Pathways in Neuroblastoma Through Phosphoproteomic Analysis.
  Kristjansdottir K, Bergelson I, Khan S, Brodeur GM, Volchenboum SL, Advances in Neuroblastoma Research, Toronto, ON
• Integration of Genomic and Proteomic Data to Identify MYCN-regulated Genes, Proteins, and Interaction Networks in Neuroblastoma Cells.
  Kristjansdottir K, Bontempo K, Regan KE, Khan S, Volchenboum SL, Advances in Neuroblastoma Research, Toronto, ON
• Development of an Open-Source, Flexible Framework for Inter-Institutional Data Sharing and Collaboration.
  Kirby C, Ambros PF, Billiter D, London WB, Mendonca E, Monclair T, Pearson, ADJ, Cohn SL, Volchenboum SL, Advances in Neuroblastoma Research, Toronto, ON
• Integration of Genomic and Proteomic Data to Identify MYCN-regulated Genes, Proteins, and Interaction Networks in Neuroblastoma Cells.
  Kristjansdottir K, Bontempo K, Regan KE, Khan S, Volchenboum SL, ASCO Annual Meeting, Chicago, IL
• Development of an Open-Source, Flexible Framework for Inter-Institutional Data Sharing and Collaboration.
  Kirby C, Ambros PF, Billiter D, London WB, Mendonca E, Monclair T, Pearson, ADJ, Cohn SL, Volchenboum SL, ASCO Annual Meeting, Chicago, IL
• Rapid and Confident Peptide Identification Through Spectral Deconvolution and Direct Mass Lookup.
  Kristjansdottir K, Selkov E, Goya J, Kron SJ, Volchenboum SL, US HUPO 8th Annual Conference, San Francisco, CA
• Genome-wide Analysis of Neuroblastoma Cells with Differential Expression of the Tumor Suppressor SPARC.
  Volchenboum SL, Chlenski A, Guerrero LJ, Salewn HR, Cohn SL, Advances in Neuroblastoma Research, Chiba, Japan
• Bayesian classifier for mass spectrometry-derived plasma biomarkers in a mouse model for intestinal tumors.
  Volchenboum SL, Hung KE, Richards LG, Krastins B, Kho AT, Sarracino D, Kucherlapati R, Human Proteome Organization (HUPO) 3rd Annual Conference, Seattle, WA
• Structure / Function Relationships in CBP (CREB Binding Protein) at the Ninth Annual Structural Biology Retreat,
  Volchenboum SL and Harrison SC, American Academy of Arts and Sciences,, Cambridge, MA
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Lectures

• Novel algorithms for high-throughput mass spectrometry analysis and real-time peptide ID. 
  University of Utah Pediatric Grand Round
• Proteomics for clinical and research applications: Neuroblastoma as a paradigm system. 
  UT Southwestern Pediatric Hematology – Oncology Grand Rounds
• Rapid and Confident Peptide Identification Through Spectral Deconvolution and Direct Mass Lookup. 
  US HUPO 8th Annual Conference, San Francisco, CA
• New systems biology tools for cancer diagnostics. 
  Personalized Cancer Therapeutics Fall Symposium, University of Chicago, Chicago, IL
• Systems Biology of Pediatric Cancer. 
  Department of Pediatrics Grand Rounds, University of Chicago, Chicago, IL
• Elucidation of structure/function relationships in isovaleryl-Co A dehydrogenase and the acyl-CoA dehydrogenase gene family. 
  Rochester, MN: Mayo Graduate School (Ph.D.);
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Other

• Strategies and Challenges in Measuring Protein Abundance Using Stable Isotope Labeling and Tandem Mass Spectrometry, Tandem Mass Spectrometry - Applications and Princi... 
  Kristjansdottir K, Takahashi S, Volchenboum SL, Kron SJ, Jeevan K. Prasain (Ed.),, .), ISBN: 978-953-51-0141-3, InTech
  http://bit.ly/MSJON2
• Idiopathic Thrombocytopenic Purpura in Zaoutis LB and Chiang VW (eds.). 
  Volchenboum SL, Clinical Pediatric Hospital Medicine, 1st edition
  Elsevier