GaryPing-ChuanWangMDPhD

PubMed

• 49 citations
  Biofilm Formation by Mycobacterium abscessus in a Lung Cavity.
  Kevin P. Fennelly, Carolyn P. Ojano-Dirain, Qingping Yang, Lin Liu, Li Lu
  American Journal of Respiratory and Critical Care Medicine. 2016-03-15
• 417 citations
  Efficacy of Gene Therapy for X-Linked Severe Combined Immunodeficiency
  Salima Hacein-Bey-Abina, Julia Hauer, Annick Lim, Capucine Picard, Gary P. Wang
  The New England Journal of Medicine. 2010-07-22
• 932 citations
  Transfusion independence and HMGA2 activation after gene therapy of human β-thalassaemia
  Marina Cavazzana-Calvo, Emmanuel Payen, Olivier Negre, Gary P. Wang, Kathleen M. Hehir
  Nature. 2010-09-16

Journal Articles

• Dysbiosis and alterations in predicted functions of subgingival microbiome in chronic periodontitis  
  Kirst ME, Li EC, Alfant B, Chi YY, Walker C, Magnusson I, Applied and Environmental Microbiology, 1/1/2015
• Immune Suppression, Intestinal Barrier Dysfunction, and Dysbiosis by Gastrointestinal Bacillus anthracis Infection  
  Lightfoot YL, Yang T, Sahay B, Zadeh M, Cheng SX, Owen JL, Mohamadzadeh M, PLoS One, 1/1/2014
• Epithelial CaSR Deficiency Alters Intestinal Integrity and Promotes Proinflammatory Immune Responses  
  Cheng SX, Lightfoot YL, Yang T, Zadeh M, Tang L, Sahay B, Owen JL, Mohamadzadeh M, FEBS Letter, 1/1/2014
• Intestinal dysbiosis and depletion of butyrogenic bacteria in Clostridium difficile infection and nosocomial diarrhea  
  Antharam VC, Li EC, Ishmael A, Sharma A, Mai V, Rand KH, J of Clin Microbiol, 1/1/2013
• Loop Residues and Catalysis in OMP Synthase  
  Hansen MR, Grubmeyer C, Biochemistry, 1/1/2012
• Loss of p19Arf in a Rag1-/- B-precursor population initiates acute B-lymphoblastic leukemia  
  Hauer, J., Mullighan, C., Morillon, E., Bruneau, J., Brousse, N., Lelorc`h, M., Romana, S., Boudil, A., Kracker, S., Bushman, F. D., Borkhardt, A., Fischer, A., Hacein..., Blood, 1/1/2011
• Transfusion independence and HMGA2 activation after gene therapy of human b-thalassemia  
  Cavazzana-Calvo M, Payen E, Negre O, Hehir K, Fusil F, Down J, Denaro M, *Brady T, Westerman K, Cavallesco R, Gillet-Legrand B, Caccavelli L, Sgarra R, Maouche-Chrétie..., Nature, 1/1/2010
• Analysis of lentiviral vector integration in HIV+ study subjects receiving autologous infusions of gene modified CD4+ T cells  
  Levine, B. L., Binder, G. K., Berry, C., Malani, N., McGarrity, G., Tebas, P., June, C., Bushman, F. D., Molecular Therapy, 1/1/2009
• Methods for integration site distribution analyses in animal cell genomes  
  Ciuffi, A., Ronen, K., Brady, T., Malani, N., Berry, C. C., Bushman, F. D., Methods, 1/1/2009
• Insertional oncogenesis in 4 patients after retrovirus-mediated gene therapy of SCID-X1  
  Hacein-Bey-Abina, S., Garrigue, A., Soulier, J., Lim, A., Morillon, E., Clappier, E., Caccavelli, L., Delabesse, E., Beldjord, K., Asnafi, V., MacIntyre, E., Dal C..., J. Clin. Invest., 1/1/2008
• DNA bar coding and pyrosequencing to analyze adverse events in therapeutic gene transfer  
  Garrigue, A., Ciuffi, A., Ronen, K., Leipzig, J., Berry, C.C., Lagresle-Peyrou, C., Benjelloun, F., Hacein-Bey-Abina, S., Fischer, A., Cavazzana-Calvo, M., Bushman, F.D., Nucleic Acids Research, 1/1/2008
• HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications  
  Ciuffi, A., Leipzig, J., Berry, C. C., Bushman, F. D., Genome Research, 1/1/2007
• DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations  
  Hoffmann, C., Minkah, N., Leipzig, J., Arens, M. Q., Tebas, P., and Bushman, F. D., Nucleic Acids Research, 1/1/2007
• A statistical method for comparing viral growth curves  
  Wang, G. P. and Bushman, F. D., J. Virol. Methods, 1/1/2006
• Motional dynamics of the catalytic loop in OMP synthase  
  Cahill, S. M., Liu, X., Girvin, M. E., and Grubmeyer, C., Biochemistry, 1/1/1999
• Kinetic mechanism of OMP synthase: a slow physical step following group transfer limits catalytic rate  
  Lundegaard, C., Jensen, K. F., Grubmeyer, C., Biochemistry, 1/1/1999
• Making a nucleotide: structure and function of orotate phosphoribosyltransferase  
  Grubmeyer, C. and Wang, G. P., Paths to Pyrimidines, 1/1/1998
• Local Effect of Glycine Substitution in a Model Helical Peptide  
  Lyu, P.C., Liff, M.I., Kallenbach, N.R., J. Am. Chem Soc., 1/1/1991
• Defining functional signatures of dysbiosis in periodontitis progression  
  Wang, G.P., Genome Medicine
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Abstracts/Posters

• Single-Variant Sequencing Revealed Rapid HCV Evolution in HIV Immune Reconstitution
  Liu, L., Nardo, D., Li, E., Conference on Retroviruses and Opportunistic Infections 2015, Seattle, WA, 1/23/2015
• Oxalobacter formigenes Colonization in a Hyperoxaluric Rat Model of Gastric Bypass Increases Beneficial Gut Bacteria and Acts as a Keystone Species
  Chastain-Gross, R., Li, E., Hatch M., Canales B.K., 2015 Annual Meeting of the American Urological Association Education and Research Inc., New Orleans, LA, 1/15/2015
• Upper airway microbiota sampling by throat swabs overestimates microbial diversity and poorly reflects the composition of lung microbiota in children with cystic fibrosis
  Kirst, M. E., Baker, D., Li, E., Abu-Hasan, M., 27th Annual North American Cystic Fibrosis Conference, Salt Lake City, UT, 1/17/2013
• Patient preferences and compliance with oral vancomycin solution for the management of Clostridium difficile infection
  Yang, D., Rajca, B., Gupte, A., Sultan, S., American College of Gastroenterology 2013 annual meeting, San Diego, CA, 1/11/2013
• Microbial shifts in oral and gut flora in patients undergoing bone marrow transplantation for hematological malignancy analyzed by 16S deep sequencing
  Kozlov, A., Antharam, V., Lybarger, J., Li, E., Wingard, J.R., ACP Florida Chapter in Orlando, 1/23/2012
• Microbial shifts in oral and gut flora in patients undergoing bone marrow transplantation for hematological malignancy analyzed by 16S deep sequencing
  Kozlov, A., Antharam, V., Lybarger, J., Li, E., Wingard, J.R., ACP National Meeting, New Orleans, 1/19/2012
• Evolution and mutation linkage of naturally occurring variants resistant to HCV protease inhibitors in cirrhotic liver transplant patients analyzed by deep sequencing
  Kirst, M.E., Li, E.C., Wang, C. X., Dong, H.J., Liu, C., Fried, M.W., Nelson, D.R., International Workshop on HIV & Hepatitis Virus Drug Resistance, Barcelona, Spain, 1/5/2012
• Molecular Analysis of Gut Microbiota Associated with Clostridium Difficile Infection
  Antharam V, Li EC, International Human Microbiome Congress 2011, Vancouver, BC, Canada, 1/9/2011
• Microbial Ecology of Gut Microbiota Associated with C. Difficile infection
  Antharam, V., Li, E., Rand, K., Mai, V., University of Florida Clinical Science Translational Institute (CTSI) Open House, Gainesville, FL, 1/1/2011
• Molecular Analysis of the Gut Microbiota associated with Clostridium difficile Infection
  Antharam, V., Li, E., Mai, V., Rand, K., EPI Research Day 2011, Gainesville, FL, 1/1/2011
• Detection of naturally occurring resistant variants in NS3 protease region of hepatitis C virus through 454 deep sequencing
  Kirst, M., Li, E., Wang, C., Fried, M., Liu, C., Nelson, DR, EPI Research Day 2011, Gainesville, FL, 1/1/2011
• Towards a Robust Approach of Identifying Novel Archaeal Species Using 16s rRNA Based PCR
  Antharam, V., Li, E., Alfant, B., University of Florida Department of Medicine Research Day, Gainesville, FL, 1/1/2010
• Analysis of Resistance Mutations to Hepatitis C Virus Protease Inhibitors by Deep Sequencing
  Kirst ME, Li EC, Wang CX, Fried M, Liu C, Nelson D, Sixth Annual Symposium of the UF Genetics Institute, Gainesville, FL, 1/1/2010
• The Role of Gut Microbiota in Clostridium Difficile Infection
  Antharam V, Li EC, Rand K, Sixth Annual Symposium of the UF Genetics Institute, Gainesville, FL, 1/1/2010
• Microbiome assessment of Clostridium difficile infection by pyrosequencing
  Antharam, V., Li, E., Alfant, B, Florida Genetics, Gainesville, FL, 1/1/2010
• Deep Sequencing Analysis of Subgingival Microbiota in Localized Aggressive Periodontitis
  Alfant B, Li EC, Shaddox L, Walker C, UF Department of Medicine Research Day 2010, Gainesville, FL, 1/1/2010
• Subgingival Microbiota in Patients with Aggressive Periodontitis Analyzed by Deep Sequencing
  Li EC, Alfant B, Walker C., UF Celebration of Research 2010, Gainesville, FL, 1/1/2010
• DNA bar coding and pyrosequencing to analyze integration site patterns in patients treated for SCID-X1 using integrating vectors
  Hacein-Bey-Abina, S., Garrigue, A., Fischer, A., Cavazzana-Calvo, M., Bushman, F.D., Cold Spring Harbor Laboratory, NY, 1/20/2008
• DNA bar coding and pyrosequencing to analyze integration site patterns in patients treated for SCID-X1 using integrating vectors
  Hacein-Bey-Abina, S., Garrigue, A., Fischer, A., Cavazzana-Calvo, M., and Bushman, F.D., The 3rd International Conference on Retroviral Integrase, Woods Hole, MA, 1/14/2008
• Analysis of sequence evolution in acute HCV using DNA barcoding and pyrosequencing
  Chang, K.M., Bushman, F.D., 15th International Symposium on Hepatitis C Virus and Related Viruses, San Antonio, TX, 1/5/2008
• HIV integration targeting: a role for post-translational modification of histones
  Ciuffi, A., Leipzig, J., Berry, C. C., and Bushman, F. D., 14th Conference on Retroviruses and Opportunistic Infections, Los Angeles, CA, 1/25/2007
• The functional and dynamic coupling of the mobile catalytic loop in orotate phosphoribosyltransferase
  Cahill, S. M., Liu, X., Girvin, M. E., and Grubmeyer, C., Annual Meeting of the American Society of Biochemistry and Molecular Biology (ASBMB), San Francisco, CA, 1/16/1999
• The role of a surface mobile loop in orotate phosphoribosyltransferase: implications for catalysis
  Lundegaard, C., Jensen, K. F., and Grubmeyer, C., 17th International Congress of Biochemistry and Molecular Biology, San Francisco, CA, 1/24/1997
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Lectures

• Alterations in the gut microbiome in Clostridium difficile infection 
  University of Florida, Gainesville, FL - 1/30/2014
• The role of gut microbiota in Clostridium difficile infection 
  University of Florida, Gainesville, FL - 1/17/2014
• If your gut bacteria aren’t happy, ain’t nobody happy 
  The Villages, FL - 1/13/2014
• Interstinal Microbiome and Dysbiosis in Clostridium difficile infection 
  University of Florida, Gainesville, FL - 1/6/2014
• Alterations in the gut microbiome in recurrent Clostridium difficile infection 
  Philadelphia, PA - 1/1/2014
• Next generation sequencing: Gene therapy, HCV and microbiome 
  University of Florida, Gainesville, FL - 1/14/2013
• Harnessing the power of the human microbiome 
  University of Florida, Gainesville, FL - 1/12/2013
• Analysis of Human microbiota by 16S deep sequencing 
  University of Florida, Gainesville, FL - 1/26/2012
• Deep sequencing analysis of naturally occurring mutations associated with resistance to HCV 
  Cambridge, MA - 1/1/2011
• Disordered distal gut microbiota in Clostridium difficile infection revealed by high density deep sequencing 
  Boston, MA - 1/1/2011
• Massively Parallel Pyrosequencing in HIV and Hepatitis C Research 
  Shands at the University of Florida at Jacksonville, FL - 1/17/2010
• Massively Parallel Pyrosequencing to Analyze Adverse Events in Gene Therapy, and Hepatitis C virus diversification 
  University of Florida Shands Cancer Center - 1/5/2010
• HCV Transmission and Diversification in Infected Subjects Analyzed by Deep Sequencing 
  San Francisco, CA - 1/1/2010
• HIV integration, adverse events in gene therapy, and HIV/HCV resistance analyzed by pyrosequencing 
  Temple University School of Medicine, Philadelphia, PA - 1/1/2008
• Sequence variations in acute HCV analyzed by DNA barcoding and pyrosequencing 
  Washington, D.C. - 1/1/2008
• HIV integration site selection: analysis of 40,000 integration sites reveals roles of histone binding and epigenetic modifications in vivo 
  Cold Spring Harbor Laboratory, NY - 1/1/2007
• DNA bar-coding and pyrophosphate sequencing reveals rare HIV drug resistance mutations of potential clinical significance 
  Barbados - 1/1/2007
• Novel therapeutic targets and gene therapy in HIV 
  Gaborone, Botswana - 1/1/2005
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Other

• Use of Truvada as prophylaxis against HIV infection 
  Wang, G.P., Ethics Talk Podcasts, Virtual Mentor, American Medical Association
  http://virtualmentor.ama-assn.org/site/ethicstalk.html
  1/1/2014