EricRobertHouptMD

PubMed

• Automated post-run analysis of arrayed quantitative PCR amplification curves using machine learning.
  Ben J Brintz, Darwin J Operario, David Garrett Brown, Shanrui Wu, Lan Wang
  Gates Open Research. 2025-01-01
• TaqMan Array Card real-time polymerase chain reaction panel to detect pathogens in whole blood of febrile inpatients in northern Tanzania, 2016-2019.
  James S Ngocho, Jie Liu, Nathaniel H Kalengo, Asia H Kipengele, Athanasia Maro
  Tropical Medicine & International Health. 2024-12-30
• Genomic Epidemiology of 2023-2024 Oropouche Outbreak in Iquitos, Peru reveals independent origin from a concurrent outbreak in Brazil.
  Maribel Paredes Olortegui, Francesca Schiaffino, Pablo Peñataro Yori, Josh M Colston, Valentino Shapiama Lopez
  Medrxiv. 2024-12-10

Journal Articles

• Oxford University Press Has Registered This DOI Pre-Publication  
  Scott K Heysell, Tawanda Gumbo, Eric R Houpt, Devyani Deshpande, Oxford University Press
• Diarrheal Etiology and Impact of Co-Infections on Rotavirus Vaccine Efficacy Estimates in a Clinical Trial of a Monovalent Human-Bovine (116E) Oral Rotavirus Vaccine, ...  
  Eric Houpt, MD, Clinical Infectious Diseases
• Oxford University Press Has Registered This DOI Pre-Publication  
  Christopher C Moore, David R Boulware, Eric R Houpt, Oxford University Press
• Outcomes and use of therapeutic drug monitoring in multidrug-resistant tuberculosis patients treated in virginia, 2009-2014  
  Heysell SK, Moore JL, Peloquin CA, Ashkin D, Houpt ER, Tuberc Respir Dis (Seoul), 1/1/2015
• Integrated Microfluidic Card with TaqMan Probes and High-Resolution Melt Analysis To Detect Tuberculosis Drug Resistance Mutations across 10 Genes  
  Pholwat S, Liu J, Stroup S, Gratz J, Banu S, Rahman SM, Ferdous SS, Foongladda S, Boonlert D, Ogarkov O, Zhdanova S, Kibiki G, Heysell S, Houpt E, MBio, 1/1/2015
• Quantitative drug-susceptibility in patients treated for multidrug-resistant tuberculosis in Bangladesh: implications for regimen choice  
  Heysell SK, Ahmed S, Ferdous SS, Khan MS, Rahman SM, Gratz J, Rahman MT, Mahmud AM, Houpt ER, Banu S, PLoS One, 1/1/2015
• Improvement in plasma drug activity during the early treatment interval among Tanzanian patients with multidrug-resistant tuberculosis  
  Ndusilo ND, Heysell SK, Mpagama SG, Gratz J, Segesela FH, Pazia SJ, Wang XQ, Houpt ER, Kibiki GS, PLoS One, 1/1/2015
• Functional characterization of IgA-targeted bacterial taxa from undernourished Malawian children that produce diet-dependent enteropathy  
  Kau AL, Planer JD, Liu J, Rao S, Yatsunenko T, Trehan I, Manary MJ, Liu TC, Stappenbeck TS, Maleta KM, Ashorn P, Dewey KG, Houpt ER, Hsieh CS, Gordon JI, Sci Transl Med, 1/1/2015
• Correlation between diarrhea severity and oocyst count via quantitative PCR or fluorescence microscopy in experimental cryptosporidiosis in calves  
  Operario DJ, Bristol LS, Liotta J, Nydam DV, Houpt ER, Am J Trop Med Hyg, 1/1/2015
• Kinetics of poliovirus shedding following oral vaccination as measured by quantitative reverse transcription-PCR versus culture  
  Taniuchi M, Begum S, Uddin MJ, Platts-Mills JA, Liu J, Kirkpatrick BD, Chowdhury AH, Jamil KM, Haque R, Petri WA, Jr., Houpt ER, J Clin Microbiol, 1/1/2015
• Molecular genotyping and quantitation assay for rotavirus surveillance  
  Liu J, Lurain K, Sobuz SU, Begum S, Kumburu H, Gratz J, Kibiki G, Toney D, Gautam R, Bowen MD, Petri WA, Jr., Haque R, Houpt ER, J Virol Methods, 1/1/2015
• Sensititre MycoTB Plate Compared to Bactec MGIT 960 for First- and Second-Line Antituberculosis Drug Susceptibility Testing in Tanzania: a Call To Operationalize MICs  
  Heysell SK, Pholwat S, Mpagama SG, Pazia SJ, Kumburu H, Ndusilo N, Gratz J, Houpt ER, Kibiki GS, Antimicrob Agents Chemother, 1/1/2015
• Comparison and development of pyrazinamide susceptibility testing methods for tuberculosis in Thailand  
  Foongladda S, Klayut W, Pholwat S, Houpt E, Diagn Microbiol Infect Dis, 1/1/2015
• Development of a TaqMan Array Card for Acute Febrile Illness Outbreak Investigation and Surveillance of Emerging Pathogens including Ebola Virus  
  Liu J, Ochieng C, Wiersma S, Stroher U, Towner JS, Whitmer S, Nichol ST, Moore CC, Kersh GJ, Kato C, Sexton C, Petersen J, Massung R, Hercik C, Crump JA, Kibiki G, Mar..., J Clin Microbiol, 1/1/2015
• Pathogen-specific burdens of community diarrhoea in developing countries: a multisite birth cohort study (MAL-ED)  
  Platts-Mills JA, Babji S, Bodhidatta L, Gratz J, Haque R, Havt A, McCormick BJ, McGrath M, Olortegui MP, Samie A, Shakoor S, Mondal D, Lima IF, Hariraju D, Rayamajhi B..., Lancet Glob Health, 1/1/2015
• Evaluating associations between vaccine response and malnutrition, gut function, and enteric infections in the MAL-ED cohort study: methods and challenges  
  Hoest C, Seidman JC, Pan W, Ambikapathi R, Kang G, Kosek M, Knobler S, Mason CJ, Miller M, Clin Infect Dis, 1/1/2014
• Postpartum depressive symptoms across time and place: structural invariance of the Self-Reporting Questionnaire among women from the international, multi-site MAL-ED s...  
  Pendergast LL, Scharf RJ, Rasmussen ZA, Seidman JC, Schaefer BA, Svensen E, Tofail F, Koshy B, Kosek M, Rasheed MA, Roshan R, Maphula A, Shrestha R, Murray-Kolb LE, J Affect Disord, 1/1/2014
• Methods of analysis of enteropathogen infection in the MAL-ED Cohort Study  
  Platts-Mills JA, McCormick BJ, Kosek M, Pan WK, Checkley W, Houpt ER, Investigators M-EN, Clin Infect Dis, 1/1/2014
• The etiology, risk factors, and interactions of enteric infections and malnutrition and the consequences for child health and development study (MAL-ED): description o...  
  Mduma ER, Gratz J, Patil C, Matson K, Dakay M, Liu S, Pascal J, McQuillin L, Mighay E, Hinken E, Ernst A, Amour C, Mvungi R, Bayyo E, Zakaria Y, Kivuyo S, Houpt ER, Sv..., Clin Infect Dis, 1/1/2014
• Assessment of environmental enteropathy in the MAL-ED cohort study: theoretical and analytic framework  
  Kosek M, Guerrant RL, Kang G, Bhutta Z, Yori PP, Gratz J, Gottlieb M, Lang D, Lee G, Haque R, Mason CJ, Ahmed T, Lima A, Petri WA, Houpt E, Olortegui MP, Seidman JC, M..., Clin Infect Dis, 1/1/2014
• Microbiologic methods utilized in the MAL-ED cohort study  
  Houpt E, Gratz J, Kosek M, Zaidi AK, Qureshi S, Kang G, Babji S, Mason C, Bodhidatta L, Samie A, Bessong P, Barrett L, Lima A, Havt A, Haque R, Mondal D, Taniuchi M, S..., Clin Infect Dis, 1/1/2014
• Modeling environmental influences on child growth in the MAL-ED cohort study: opportunities and challenges  
  Richard SA, McCormick BJ, Miller MA, Caulfield LE, Checkley W, Clin Infect Dis, 1/1/2014
• Disease surveillance methods used in the 8-site MAL-ED cohort study  
  Richard SA, Barrett LJ, Guerrant RL, Checkley W, Miller MA, Clin Infect Dis, 1/1/2014
• The MAL-ED cohort study: methods and lessons learned when assessing early child development and caregiving mediators in infants and young children in 8 low- and middle...  
  Murray-Kolb LE, Rasmussen ZA, Scharf RJ, Rasheed MA, Svensen E, Seidman JC, Tofail F, Koshy B, Shrestha R, Maphula A, Vasquez AO, da Costa HP, Yousafzai AK, Oria RB, R..., Clin Infect Dis, 1/1/2014
• Infant feeding practices, dietary adequacy, and micronutrient status measures in the MAL-ED study  
  Caulfield LE, Bose A, Chandyo RK, Nesamvuni C, de Moraes ML, Turab A, Patil C, Mahfuz M, Ambikapathi R, Ahmed T, Clin Infect Dis, 1/1/2014
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Books/Book Chapters

• Amebiasis 
  Hung T., Houpt EHunter’s Tropical MedicineEdition 9th,2011
• Antimicrobial Therapy and Vaccines 
  Chapter: Cystoisospora belli 
  Houpt E, Hung, TEditors: Yu.Lippincott Williams and WilkinsEdition 3rd,2009
• Pharmacology and Therapeutics: Principles to Practice 
  Chapter: Protozoan and Helminthic Infections 
  Chaudhry O, Houpt EEditors: Waldman and Terzic.Elsevier2007
• A Practical Approach to Infectious Diseases 
  Chapter: Sexually Transmitted, Gynecologic, and Obstetric Infections 
  Houpt E, Rein MEditors: Reese, Betts.Little, Brown and Co., Boston, MAEdition 5th,2003
• The Encyclopedia of the Neurological Sciences 
  Chapter: Rickettsial Infections 
  Houpt E, Petri Jr, WEditors: Aminoff, Daroff.Academic Press, San Diego, CA2003
• Antimicrobial Therapy and Vaccines 
  Chapter: Therapy for Amebiasis 
  Houpt E, Petri, Jr, WEditors: Yu.Lippincott Williams and WilkinsEdition 2nd,2002
• Principles and Practice of Pediatric Infectious Diseases 
  Chapter: Acanthamoeba spp 
  Page 1293 - 1295Houpt E, Petri W JrEditors: Long, SS.Churchill Livingstone Inc., New York, NYEdition 2nd,2002
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Lectures

• Symposium, Impact of quantitative PCR based detection methods on assessment of ETEC and Shigella 
  1/1/2015
• TaqMan Array Cards for Diarrheal Etiology 
  1/1/2015
• Reanalysis of diarrhea etiology from GEMS using quantitative molecular diagnostics 
  Edinburg, Hidalgo County, TX - 1/1/2015
• Infectious Diseases 
  1/1/2014
• Diagnostics for Cryptosporidium 
  1/1/2014
• Quantitative Molecular Diagnostics for Diarrheal Disease Etiology 
  1/1/2014
• Quantitative Molecular Diagnostics for Refined Vaccine Effectiveness Estimates 
  Washington, DC - 1/1/2014
• Tuberculosis and Diabetes 
  Newark, NJ - 1/14/2013
• Drug Susceptibility Testing in the Era of Genetic Methods and New Drugs 
  Atlanta, GA - 1/11/2013
• Tuberculosis Update 
  1/1/2013
• Intestinal Protozoa Update 
  1/1/2013
• Consultation on the Standardization of Reporting Tuberculosis Molecular Diagnostic Results 
  Atlanta, GA - 1/1/2013
• Diarrheal diseases in developing countries: Lots of Pathogens 
  1/1/2012
• New Molecular Diagnostics for Intestinal Parasites “New Diagnostics for Parasitic Infections Symposium” 
  1/1/2012
• New Diagnostics for Childhood Diarrhea 
  1/1/2011
• Need and Challenges of a Cryptosporidium Vaccine 
  Cannes, France - 1/1/2011
• Use of diagnostics to determine poliovirus vaccine failure and rotavirus vaccine efficacy 
  Gates Foundation, Seattle, WA - 1/1/2011
• Multiplex PCR detection of Enteropathogens 
  Gates Foundation, Seattle, WA - 1/1/2011
• Diagnostic and Management Practices for MDR-TB in Virginia, USA 
  Irkutsk, Russia - 1/1/2011
• Giardia and Cryptosporidium Update 
  Maputo, Mozambique - 1/1/2010
• New Molecular Approaches to Detecting Enteropathogens 
  The Gambia - 1/1/2010
• New Molecular Diagnostics for Enterics 
  Bangkok, Thailand, 2010; Kathmandu, Nepa, 2010 - 1/1/2010
• Enterics, Detection to Disease 
  Albany, NY - 1/1/2010
• Rapid PMA-PCR assay for drug resistant tuberculosis strains 
  Atlanta, GA - 1/1/2010
• Therapeutic Drug Monitoring for Tuberculosis in a state Tb program 
  Raleigh, NC - 1/1/2010
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